Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 TSEN15P1-201ENST00000423257 515 ntBASIC16.69■□□□□ 0.26
GABREP78334 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.69■□□□□ 0.26
GABREP78334 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.69■□□□□ 0.26
GABREP78334 AL031432.2-201ENST00000566714 459 ntBASIC16.69■□□□□ 0.26
GABREP78334 AL928711.1-201ENST00000570165 459 ntBASIC16.69■□□□□ 0.26
GABREP78334 AC093028.1-201ENST00000622998 982 ntBASIC16.69■□□□□ 0.26
GABREP78334 AC004877.2-201ENST00000623941 599 ntBASIC16.69■□□□□ 0.26
GABREP78334 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 BCAR1-209ENST00000546196 1340 ntBASIC16.69■□□□□ 0.26
GABREP78334 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.68■□□□□ 0.26
GABREP78334 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 IGLL3P-201ENST00000412472 434 ntBASIC16.68■□□□□ 0.26
GABREP78334 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.68■□□□□ 0.26
GABREP78334 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GABREP78334 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.68■□□□□ 0.26
GABREP78334 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.68■□□□□ 0.26
GABREP78334 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.68■□□□□ 0.26
GABREP78334 AC010507.1-201ENST00000633895 436 ntBASIC16.68■□□□□ 0.26
GABREP78334 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.68■□□□□ 0.26
GABREP78334 AL031598.1-201ENST00000561511 1773 ntBASIC16.68■□□□□ 0.26
GABREP78334 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.68■□□□□ 0.26
GABREP78334 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABREP78334 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 AC090340.1-201ENST00000620778 4980 ntBASIC16.67■□□□□ 0.26
GABREP78334 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.67■□□□□ 0.26
GABREP78334 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.67■□□□□ 0.26
GABREP78334 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
GABREP78334 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 AC003669.1-201ENST00000334569 611 ntBASIC16.67■□□□□ 0.26
GABREP78334 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.67■□□□□ 0.26
GABREP78334 FAM58CP-201ENST00000435741 640 ntBASIC16.67■□□□□ 0.26
GABREP78334 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.67■□□□□ 0.26
GABREP78334 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.67■□□□□ 0.26
GABREP78334 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.67■□□□□ 0.26
GABREP78334 AL805961.1-202ENST00000641562 540 ntBASIC16.67■□□□□ 0.26
GABREP78334 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.67■□□□□ 0.26
GABREP78334 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABREP78334 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms