Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.88■□□□□ 0.29
VSX2P58304 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 AP001269.4-201ENST00000609611 512 ntBASIC16.88■□□□□ 0.29
VSX2P58304 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.88■□□□□ 0.29
VSX2P58304 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.88■□□□□ 0.29
VSX2P58304 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSX2P58304 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
VSX2P58304 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VSX2P58304 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.87■□□□□ 0.29
VSX2P58304 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.87■□□□□ 0.29
VSX2P58304 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.87■□□□□ 0.29
VSX2P58304 AC079781.3-201ENST00000449110 356 ntBASIC16.87■□□□□ 0.29
VSX2P58304 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VSX2P58304 AC008608.2-201ENST00000606089 416 ntBASIC16.87■□□□□ 0.29
VSX2P58304 AL031008.1-201ENST00000619963 541 ntBASIC16.87■□□□□ 0.29
VSX2P58304 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VSX2P58304 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VSX2P58304 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VSX2P58304 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.86■□□□□ 0.29
VSX2P58304 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 MTDHP3-201ENST00000594186 672 ntBASIC16.86■□□□□ 0.29
VSX2P58304 AL121912.1-201ENST00000603683 238 ntBASIC16.86■□□□□ 0.29
VSX2P58304 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.86■□□□□ 0.29
VSX2P58304 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VSX2P58304 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VSX2P58304 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.85■□□□□ 0.29
VSX2P58304 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSX2P58304 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.85■□□□□ 0.29
VSX2P58304 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.85■□□□□ 0.29
VSX2P58304 AC103564.2-201ENST00000432853 1299 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms