Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX3P56589 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 TPM4P1-201ENST00000436100 807 ntBASIC19.4■□□□□ 0.7
PEX3P56589 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.4■□□□□ 0.7
PEX3P56589 AC002558.1-201ENST00000488906 803 ntBASIC19.4■□□□□ 0.7
PEX3P56589 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.4■□□□□ 0.7
PEX3P56589 IGHV3-52-201ENST00000519770 353 ntBASIC19.4■□□□□ 0.7
PEX3P56589 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.4■□□□□ 0.7
PEX3P56589 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.4■□□□□ 0.7
PEX3P56589 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 AL355877.3-201ENST00000622820 899 ntBASIC19.4■□□□□ 0.7
PEX3P56589 AC073592.5-201ENST00000624854 528 ntBASIC19.4■□□□□ 0.7
PEX3P56589 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.4■□□□□ 0.7
PEX3P56589 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PEX3P56589 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PEX3P56589 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PEX3P56589 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PEX3P56589 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PEX3P56589 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
PEX3P56589 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PEX3P56589 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
PEX3P56589 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PEX3P56589 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.39■□□□□ 0.69
PEX3P56589 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PEX3P56589 RBM17P3-201ENST00000417687 1192 ntBASIC19.39■□□□□ 0.69
PEX3P56589 AC079781.3-201ENST00000449110 356 ntBASIC19.39■□□□□ 0.69
PEX3P56589 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.39■□□□□ 0.69
PEX3P56589 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.39■□□□□ 0.69
PEX3P56589 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.39■□□□□ 0.69
PEX3P56589 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.39■□□□□ 0.69
PEX3P56589 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PEX3P56589 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.39■□□□□ 0.69
PEX3P56589 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.39■□□□□ 0.69
PEX3P56589 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.39■□□□□ 0.69
PEX3P56589 AC132938.5-201ENST00000624980 1813 ntBASIC19.39■□□□□ 0.69
PEX3P56589 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PEX3P56589 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PEX3P56589 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.38■□□□□ 0.69
PEX3P56589 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 FAAHP1-202ENST00000446499 1238 ntBASIC19.38■□□□□ 0.69
PEX3P56589 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.38■□□□□ 0.69
PEX3P56589 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PEX3P56589 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.38■□□□□ 0.69
PEX3P56589 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PEX3P56589 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.38■□□□□ 0.69
PEX3P56589 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.38■□□□□ 0.69
PEX3P56589 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PEX3P56589 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.38■□□□□ 0.69
PEX3P56589 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 AL031008.1-201ENST00000619963 541 ntBASIC19.38■□□□□ 0.69
PEX3P56589 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PEX3P56589 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.38■□□□□ 0.69
PEX3P56589 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.38■□□□□ 0.69
PEX3P56589 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.37■□□□□ 0.69
PEX3P56589 AC133963.1-201ENST00000504166 1679 ntBASIC19.37■□□□□ 0.69
PEX3P56589 HLA-J-201ENST00000462773 1622 ntBASIC19.37■□□□□ 0.69
PEX3P56589 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.37■□□□□ 0.69
PEX3P56589 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.37■□□□□ 0.69
PEX3P56589 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PEX3P56589 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms