Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.21□□□□□ -0.61
UBE2AP49459 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.21□□□□□ -0.61
UBE2AP49459 AC141257.4-201ENST00000634557 245 ntBASIC11.21□□□□□ -0.61
UBE2AP49459 AC136944.6-201ENST00000634818 245 ntBASIC11.21□□□□□ -0.61
UBE2AP49459 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC11.21□□□□□ -0.61
UBE2AP49459 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UBE2AP49459 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
UBE2AP49459 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2AP49459 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2AP49459 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2AP49459 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.21□□□□□ -0.62
UBE2AP49459 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
UBE2AP49459 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
UBE2AP49459 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2AP49459 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.21□□□□□ -0.62
UBE2AP49459 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.21□□□□□ -0.62
UBE2AP49459 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UBE2AP49459 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
UBE2AP49459 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
UBE2AP49459 AC087499.1-201ENST00000418141 1075 ntBASIC11.2□□□□□ -0.62
UBE2AP49459 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.2□□□□□ -0.62
UBE2AP49459 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.2□□□□□ -0.62
UBE2AP49459 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.2□□□□□ -0.62
UBE2AP49459 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
UBE2AP49459 AL031432.5-201ENST00000641059 760 ntBASIC11.2□□□□□ -0.62
UBE2AP49459 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 AL513477.1-201ENST00000602865 2407 ntBASIC11.2□□□□□ -0.62
UBE2AP49459 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UBE2AP49459 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.2□□□□□ -0.62
UBE2AP49459 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 AC093010.1-201ENST00000473625 1624 ntBASIC11.2□□□□□ -0.62
UBE2AP49459 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UBE2AP49459 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UBE2AP49459 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
UBE2AP49459 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms