Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A6P48664 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SLC1A6P48664 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 MIR1238-201ENST00000408483 83 ntBASIC17.34■□□□□ 0.37
SLC1A6P48664 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A6P48664 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SLC1A6P48664 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 Z99916.2-201ENST00000604037 246 ntBASIC17.34■□□□□ 0.37
SLC1A6P48664 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 AL157888.1-201ENST00000631930 593 ntBASIC17.34■□□□□ 0.37
SLC1A6P48664 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
SLC1A6P48664 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 AC005915.1-201ENST00000624912 2018 ntBASIC17.33■□□□□ 0.37
SLC1A6P48664 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A6P48664 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC1A6P48664 BX276092.7-203ENST00000637198 1536 ntBASIC17.33■□□□□ 0.37
SLC1A6P48664 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC1A6P48664 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 INGX-201ENST00000359239 846 ntBASIC17.33■□□□□ 0.36
SLC1A6P48664 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 GCSHP5-201ENST00000443090 522 ntBASIC17.33■□□□□ 0.36
SLC1A6P48664 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A6P48664 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC1A6P48664 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC1A6P48664 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC1A6P48664 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A6P48664 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC1A6P48664 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A6P48664 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A6P48664 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SLC1A6P48664 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 LINC01311-201ENST00000565162 1445 ntBASIC17.32■□□□□ 0.36
SLC1A6P48664 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 AC005104.2-201ENST00000427818 678 ntBASIC17.32■□□□□ 0.36
SLC1A6P48664 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 TSPY20P-201ENST00000450910 630 ntBASIC17.32■□□□□ 0.36
SLC1A6P48664 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC1A6P48664 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A6P48664 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A6P48664 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC1A6P48664 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC1A6P48664 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC1A6P48664 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC1A6P48664 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms