Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEDD4P46934 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NEDD4P46934 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.72■□□□□ 0.91
NEDD4P46934 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NEDD4P46934 PP12613-201ENST00000424958 2230 ntBASIC20.72■□□□□ 0.91
NEDD4P46934 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NEDD4P46934 AC004817.3-201ENST00000602957 2129 ntBASIC20.72■□□□□ 0.91
NEDD4P46934 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NEDD4P46934 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
NEDD4P46934 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.71■□□□□ 0.91
NEDD4P46934 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
NEDD4P46934 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NEDD4P46934 AC079776.2-201ENST00000641154 1609 ntBASIC20.71■□□□□ 0.91
NEDD4P46934 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.71■□□□□ 0.91
NEDD4P46934 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.71■□□□□ 0.91
NEDD4P46934 IGHV3-52-201ENST00000519770 353 ntBASIC20.71■□□□□ 0.91
NEDD4P46934 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.71■□□□□ 0.91
NEDD4P46934 AL121912.1-201ENST00000603683 238 ntBASIC20.71■□□□□ 0.91
NEDD4P46934 AC073592.4-201ENST00000623827 446 ntBASIC20.71■□□□□ 0.91
NEDD4P46934 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD4P46934 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NEDD4P46934 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NEDD4P46934 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
NEDD4P46934 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEDD4P46934 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.7■□□□□ 0.9
NEDD4P46934 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.7■□□□□ 0.9
NEDD4P46934 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD4P46934 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD4P46934 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEDD4P46934 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD4P46934 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD4P46934 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 BX005266.1-201ENST00000473402 457 ntBASIC20.7■□□□□ 0.9
NEDD4P46934 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.7■□□□□ 0.9
NEDD4P46934 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.7■□□□□ 0.9
NEDD4P46934 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD4P46934 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.7■□□□□ 0.9
NEDD4P46934 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD4P46934 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD4P46934 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 LTB4R2-202ENST00000528054 3092 ntBASIC20.69■□□□□ 0.9
NEDD4P46934 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD4P46934 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
NEDD4P46934 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD4P46934 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
NEDD4P46934 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD4P46934 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
NEDD4P46934 AL139327.4-201ENST00000612362 153 ntBASIC20.69■□□□□ 0.9
NEDD4P46934 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD4P46934 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.69■□□□□ 0.9
NEDD4P46934 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NEDD4P46934 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.69■□□□□ 0.9
NEDD4P46934 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NEDD4P46934 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD4P46934 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.68■□□□□ 0.9
NEDD4P46934 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
NEDD4P46934 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD4P46934 AC009336.1-201ENST00000608941 1553 ntBASIC20.68■□□□□ 0.9
NEDD4P46934 AC003669.1-201ENST00000334569 611 ntBASIC20.68■□□□□ 0.9
NEDD4P46934 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms