Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CEACAM3P40198 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CEACAM3P40198 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 GNAS-203ENST00000306120 1878 ntBASIC14.4□□□□□ -0.1
CEACAM3P40198 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CEACAM3P40198 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CEACAM3P40198 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.39□□□□□ -0.11
CEACAM3P40198 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CEACAM3P40198 AL356309.3-201ENST00000624132 1934 ntBASIC14.39□□□□□ -0.11
CEACAM3P40198 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.39□□□□□ -0.11
CEACAM3P40198 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CEACAM3P40198 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CEACAM3P40198 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.39□□□□□ -0.11
CEACAM3P40198 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.39□□□□□ -0.11
CEACAM3P40198 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.39□□□□□ -0.11
CEACAM3P40198 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.39□□□□□ -0.11
CEACAM3P40198 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.39□□□□□ -0.11
CEACAM3P40198 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CEACAM3P40198 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.39□□□□□ -0.11
CEACAM3P40198 MIR3180-1-201ENST00000580374 94 ntBASIC14.39□□□□□ -0.11
CEACAM3P40198 MIR3180-3-201ENST00000584616 94 ntBASIC14.39□□□□□ -0.11
CEACAM3P40198 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.39□□□□□ -0.11
CEACAM3P40198 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.39□□□□□ -0.11
CEACAM3P40198 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.39□□□□□ -0.11
CEACAM3P40198 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 NSUN5P1-202ENST00000421140 1535 ntBASIC14.39□□□□□ -0.11
CEACAM3P40198 NSUN5P2-203ENST00000457352 1529 ntBASIC14.39□□□□□ -0.11
CEACAM3P40198 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CEACAM3P40198 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CEACAM3P40198 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 AL139384.1-201ENST00000612143 3047 ntBASIC14.39□□□□□ -0.11
CEACAM3P40198 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.39□□□□□ -0.11
CEACAM3P40198 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CEACAM3P40198 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 AL845331.1-201ENST00000424978 1190 ntBASIC14.38□□□□□ -0.11
CEACAM3P40198 AC103564.2-201ENST00000432853 1299 ntBASIC14.38□□□□□ -0.11
CEACAM3P40198 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.38□□□□□ -0.11
CEACAM3P40198 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.38□□□□□ -0.11
CEACAM3P40198 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.38□□□□□ -0.11
CEACAM3P40198 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 LINC01711-201ENST00000598340 967 ntBASIC14.38□□□□□ -0.11
CEACAM3P40198 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.38□□□□□ -0.11
CEACAM3P40198 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms