Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.37■□□□□ 0.05
GDNFP39905 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
GDNFP39905 HLA-J-201ENST00000462773 1622 ntBASIC15.37■□□□□ 0.05
GDNFP39905 MMP23A-201ENST00000234610 1017 ntBASIC15.37■□□□□ 0.05
GDNFP39905 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.37■□□□□ 0.05
GDNFP39905 MIR149-201ENST00000384879 89 ntBASIC15.37■□□□□ 0.05
GDNFP39905 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.37■□□□□ 0.05
GDNFP39905 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.37■□□□□ 0.05
GDNFP39905 MCCD1P1-208ENST00000445732 328 ntBASIC15.37■□□□□ 0.05
GDNFP39905 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.37■□□□□ 0.05
GDNFP39905 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.37■□□□□ 0.05
GDNFP39905 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
GDNFP39905 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
GDNFP39905 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GDNFP39905 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
GDNFP39905 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 AC092338.2-201ENST00000568827 1415 ntBASIC15.36■□□□□ 0.05
GDNFP39905 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
GDNFP39905 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 SLC25A1P2-201ENST00000430693 912 ntBASIC15.36■□□□□ 0.05
GDNFP39905 AC007663.1-201ENST00000438948 1240 ntBASIC15.36■□□□□ 0.05
GDNFP39905 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.36■□□□□ 0.05
GDNFP39905 BX088651.1-201ENST00000540551 451 ntBASIC15.36■□□□□ 0.05
GDNFP39905 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 AL353719.1-201ENST00000566847 864 ntBASIC15.36■□□□□ 0.05
GDNFP39905 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.36■□□□□ 0.05
GDNFP39905 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.36■□□□□ 0.05
GDNFP39905 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 AL163051.1-201ENST00000569214 1512 ntBASIC15.36■□□□□ 0.05
GDNFP39905 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
GDNFP39905 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GDNFP39905 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.36■□□□□ 0.05
GDNFP39905 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.36■□□□□ 0.05
GDNFP39905 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 AC100803.2-201ENST00000562459 1963 ntBASIC15.35■□□□□ 0.05
GDNFP39905 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.35■□□□□ 0.05
GDNFP39905 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.35■□□□□ 0.05
GDNFP39905 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
GDNFP39905 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 C2orf69P3-201ENST00000565542 1120 ntBASIC15.35■□□□□ 0.05
GDNFP39905 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 AC036111.1-201ENST00000533973 1582 ntBASIC15.35■□□□□ 0.05
GDNFP39905 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
GDNFP39905 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
GDNFP39905 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.35■□□□□ 0.05
GDNFP39905 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GDNFP39905 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
GDNFP39905 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms