Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN3P20807 DDX43P3-201ENST00000441064 443 ntBASIC16.98■□□□□ 0.31
CAPN3P20807 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN3P20807 COX11P1-201ENST00000489116 835 ntBASIC16.98■□□□□ 0.31
CAPN3P20807 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPN3P20807 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN3P20807 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPN3P20807 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 IER3-202ENST00000376377 1350 ntBASIC16.98■□□□□ 0.31
CAPN3P20807 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CAPN3P20807 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPN3P20807 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN3P20807 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN3P20807 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN3P20807 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CAPN3P20807 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 YBX1P2-201ENST00000489612 999 ntBASIC16.97■□□□□ 0.31
CAPN3P20807 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 AL512604.3-201ENST00000569583 964 ntBASIC16.97■□□□□ 0.31
CAPN3P20807 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPN3P20807 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN3P20807 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 AC060834.1-201ENST00000443027 2032 ntBASIC16.97■□□□□ 0.31
CAPN3P20807 OR6D1P-202ENST00000641007 5290 ntBASIC16.97■□□□□ 0.31
CAPN3P20807 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN3P20807 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN3P20807 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN3P20807 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN3P20807 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN3P20807 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 PVRIG2P-201ENST00000435460 978 ntBASIC16.96■□□□□ 0.31
CAPN3P20807 HOMER2P1-201ENST00000455653 964 ntBASIC16.96■□□□□ 0.31
CAPN3P20807 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CAPN3P20807 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN3P20807 AL138966.2-201ENST00000621997 464 ntBASIC16.96■□□□□ 0.31
CAPN3P20807 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN3P20807 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN3P20807 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN3P20807 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN3P20807 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.96■□□□□ 0.3
CAPN3P20807 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.96■□□□□ 0.3
CAPN3P20807 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CAPN3P20807 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms