Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 AC105917.1-201ENST00000506637 2539 ntBASIC13.53□□□□□ -0.24
RAB4AP20338 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 CICP4-201ENST00000447359 2812 ntBASIC13.53□□□□□ -0.24
RAB4AP20338 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RAB4AP20338 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RAB4AP20338 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.53□□□□□ -0.24
RAB4AP20338 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 AL137784.3-201ENST00000623858 2288 ntBASIC13.53□□□□□ -0.24
RAB4AP20338 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.53□□□□□ -0.24
RAB4AP20338 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.53□□□□□ -0.24
RAB4AP20338 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB4AP20338 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB4AP20338 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
RAB4AP20338 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB4AP20338 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB4AP20338 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RAB4AP20338 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB4AP20338 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB4AP20338 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 AC034268.1-201ENST00000441047 882 ntBASIC13.52□□□□□ -0.25
RAB4AP20338 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB4AP20338 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB4AP20338 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB4AP20338 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.52□□□□□ -0.25
RAB4AP20338 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RAB4AP20338 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB4AP20338 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB4AP20338 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RAB4AP20338 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB4AP20338 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB4AP20338 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RAB4AP20338 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB4AP20338 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB4AP20338 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 CICP13-201ENST00000422015 2789 ntBASIC13.51□□□□□ -0.25
RAB4AP20338 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB4AP20338 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB4AP20338 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB4AP20338 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB4AP20338 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RAB4AP20338 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB4AP20338 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms