Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.93■□□□□ 0.62
CD58P19256 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD58P19256 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CD58P19256 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.93■□□□□ 0.62
CD58P19256 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD58P19256 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD58P19256 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
CD58P19256 SIRPAP1-201ENST00000448467 1770 ntBASIC18.93■□□□□ 0.62
CD58P19256 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD58P19256 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CD58P19256 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CD58P19256 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CD58P19256 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CD58P19256 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.92■□□□□ 0.62
CD58P19256 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CD58P19256 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CD58P19256 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.92■□□□□ 0.62
CD58P19256 RCN1P2-201ENST00000398357 915 ntBASIC18.92■□□□□ 0.62
CD58P19256 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.92■□□□□ 0.62
CD58P19256 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.92■□□□□ 0.62
CD58P19256 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.92■□□□□ 0.62
CD58P19256 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CD58P19256 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CD58P19256 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.92■□□□□ 0.62
CD58P19256 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CD58P19256 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.91■□□□□ 0.62
CD58P19256 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CD58P19256 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 COX5BP2-201ENST00000392354 334 ntBASIC18.91■□□□□ 0.62
CD58P19256 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.91■□□□□ 0.62
CD58P19256 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.91■□□□□ 0.62
CD58P19256 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.91■□□□□ 0.62
CD58P19256 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.91■□□□□ 0.62
CD58P19256 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.91■□□□□ 0.62
CD58P19256 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.91■□□□□ 0.62
CD58P19256 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.91■□□□□ 0.62
CD58P19256 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.91■□□□□ 0.62
CD58P19256 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.91■□□□□ 0.62
CD58P19256 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CD58P19256 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CD58P19256 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CD58P19256 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CD58P19256 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CD58P19256 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 FAM220CP-201ENST00000395253 831 ntBASIC18.9■□□□□ 0.62
CD58P19256 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CD58P19256 AC011467.2-201ENST00000598425 242 ntBASIC18.9■□□□□ 0.62
CD58P19256 AC114341.1-201ENST00000618070 349 ntBASIC18.9■□□□□ 0.62
CD58P19256 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.9■□□□□ 0.62
CD58P19256 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CD58P19256 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 LINC00304-203ENST00000565008 1864 ntBASIC18.9■□□□□ 0.62
CD58P19256 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.9■□□□□ 0.62
CD58P19256 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CD58P19256 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CD58P19256 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CD58P19256 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.89■□□□□ 0.62
CD58P19256 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CD58P19256 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CD58P19256 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
CD58P19256 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms