Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.29■□□□□ 0.52
H2AFXP16104 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.29■□□□□ 0.52
H2AFXP16104 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.29■□□□□ 0.52
H2AFXP16104 MIPEPP3-201ENST00000412105 444 ntBASIC18.29■□□□□ 0.52
H2AFXP16104 AC004951.3-201ENST00000418645 1148 ntBASIC18.29■□□□□ 0.52
H2AFXP16104 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.29■□□□□ 0.52
H2AFXP16104 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.29■□□□□ 0.52
H2AFXP16104 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.29■□□□□ 0.52
H2AFXP16104 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.29■□□□□ 0.52
H2AFXP16104 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.29■□□□□ 0.52
H2AFXP16104 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
H2AFXP16104 LINC00167-201ENST00000530583 1419 ntBASIC18.29■□□□□ 0.52
H2AFXP16104 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.29■□□□□ 0.52
H2AFXP16104 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 AC093525.9-201ENST00000624961 1746 ntBASIC18.29■□□□□ 0.52
H2AFXP16104 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
H2AFXP16104 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2AFXP16104 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
H2AFXP16104 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
H2AFXP16104 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 AC005104.2-201ENST00000427818 678 ntBASIC18.28■□□□□ 0.52
H2AFXP16104 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.28■□□□□ 0.52
H2AFXP16104 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.28■□□□□ 0.52
H2AFXP16104 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.28■□□□□ 0.52
H2AFXP16104 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 MIR3180-5-201ENST00000583743 153 ntBASIC18.28■□□□□ 0.52
H2AFXP16104 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2AFXP16104 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H2AFXP16104 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2AFXP16104 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.27■□□□□ 0.52
H2AFXP16104 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.27■□□□□ 0.52
H2AFXP16104 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.27■□□□□ 0.52
H2AFXP16104 UNC93B4-201ENST00000505679 747 ntBASIC18.27■□□□□ 0.52
H2AFXP16104 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.27■□□□□ 0.52
H2AFXP16104 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.27■□□□□ 0.52
H2AFXP16104 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.27■□□□□ 0.52
H2AFXP16104 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2AFXP16104 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms