Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IGHV3-43DP0DP04 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 SPDYE13P-201ENST00000445314 798 ntBASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.66□□□□□ -0.06
IGHV3-43DP0DP04 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 AC080080.1-201ENST00000625121 2420 ntBASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 MTCL1P1-201ENST00000446207 792 ntBASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 AL390719.2-201ENST00000606993 987 ntBASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 HLA-J-201ENST00000462773 1622 ntBASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms