Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SFTPBP07988 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SFTPBP07988 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SFTPBP07988 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.36■□□□□ 0.05
SFTPBP07988 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SFTPBP07988 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SFTPBP07988 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SFTPBP07988 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.35■□□□□ 0.05
SFTPBP07988 AC124067.4-201ENST00000519691 2379 ntBASIC15.35■□□□□ 0.05
SFTPBP07988 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.35■□□□□ 0.05
SFTPBP07988 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.35■□□□□ 0.05
SFTPBP07988 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
SFTPBP07988 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SFTPBP07988 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 KRT18P38-201ENST00000449496 1282 ntBASIC15.35■□□□□ 0.05
SFTPBP07988 HOMER2P1-201ENST00000455653 964 ntBASIC15.35■□□□□ 0.05
SFTPBP07988 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SFTPBP07988 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.35■□□□□ 0.05
SFTPBP07988 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.35■□□□□ 0.05
SFTPBP07988 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SFTPBP07988 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.35■□□□□ 0.05
SFTPBP07988 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SFTPBP07988 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SFTPBP07988 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.35■□□□□ 0.05
SFTPBP07988 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SFTPBP07988 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SFTPBP07988 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.34■□□□□ 0.05
SFTPBP07988 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.34■□□□□ 0.05
SFTPBP07988 AL031133.1-201ENST00000406807 723 ntBASIC15.34■□□□□ 0.05
SFTPBP07988 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.34■□□□□ 0.05
SFTPBP07988 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 DUTP2-201ENST00000519164 463 ntBASIC15.34■□□□□ 0.05
SFTPBP07988 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SFTPBP07988 AC100803.2-201ENST00000562459 1963 ntBASIC15.34■□□□□ 0.05
SFTPBP07988 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.34■□□□□ 0.05
SFTPBP07988 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 AL645608.8-201ENST00000606034 2086 ntBASIC15.34■□□□□ 0.05
SFTPBP07988 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SFTPBP07988 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SFTPBP07988 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.34■□□□□ 0.05
SFTPBP07988 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.34■□□□□ 0.05
SFTPBP07988 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SFTPBP07988 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SFTPBP07988 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SFTPBP07988 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SFTPBP07988 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.33■□□□□ 0.05
SFTPBP07988 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SFTPBP07988 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SFTPBP07988 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
SFTPBP07988 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SFTPBP07988 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SFTPBP07988 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SFTPBP07988 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.33■□□□□ 0.05
SFTPBP07988 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SFTPBP07988 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms