Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COL1A1P02452 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.08■□□□□ 0.97
COL1A1P02452 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL1A1P02452 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.08■□□□□ 0.97
COL1A1P02452 AC005829.1-201ENST00000570002 483 ntBASIC21.08■□□□□ 0.97
COL1A1P02452 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.08■□□□□ 0.97
COL1A1P02452 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.08■□□□□ 0.97
COL1A1P02452 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
COL1A1P02452 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.08■□□□□ 0.97
COL1A1P02452 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
COL1A1P02452 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
COL1A1P02452 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A1P02452 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A1P02452 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
COL1A1P02452 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
COL1A1P02452 AC046185.3-201ENST00000623228 1824 ntBASIC21.08■□□□□ 0.96
COL1A1P02452 AL135999.2-201ENST00000622438 1686 ntBASIC21.08■□□□□ 0.96
COL1A1P02452 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.07■□□□□ 0.96
COL1A1P02452 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 ACTG1P4-201ENST00000425123 1122 ntBASIC21.07■□□□□ 0.96
COL1A1P02452 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
COL1A1P02452 CYMP-203ENST00000474680 1263 ntBASIC21.07■□□□□ 0.96
COL1A1P02452 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.07■□□□□ 0.96
COL1A1P02452 AC010507.1-201ENST00000633895 436 ntBASIC21.07■□□□□ 0.96
COL1A1P02452 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.07■□□□□ 0.96
COL1A1P02452 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A1P02452 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.07■□□□□ 0.96
COL1A1P02452 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
COL1A1P02452 AC004790.2-201ENST00000623588 572 ntBASIC21.07■□□□□ 0.96
COL1A1P02452 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A1P02452 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.06■□□□□ 0.96
COL1A1P02452 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
COL1A1P02452 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 KRT18P28-201ENST00000453838 1332 ntBASIC21.06■□□□□ 0.96
COL1A1P02452 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.06■□□□□ 0.96
COL1A1P02452 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL1A1P02452 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.06■□□□□ 0.96
COL1A1P02452 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.06■□□□□ 0.96
COL1A1P02452 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.06■□□□□ 0.96
COL1A1P02452 MKNK2P1-201ENST00000437526 628 ntBASIC21.06■□□□□ 0.96
COL1A1P02452 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
COL1A1P02452 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
COL1A1P02452 AL513190.1-201ENST00000621254 727 ntBASIC21.06■□□□□ 0.96
COL1A1P02452 AC092865.6-201ENST00000642101 219 ntBASIC21.06■□□□□ 0.96
COL1A1P02452 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A1P02452 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 AL590787.1-201ENST00000568856 1315 ntBASIC21.05■□□□□ 0.96
COL1A1P02452 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL1A1P02452 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL1A1P02452 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 NEFHP1-201ENST00000412845 2629 ntBASIC21.05■□□□□ 0.96
COL1A1P02452 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL1A1P02452 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL1A1P02452 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A1P02452 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A1P02452 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A1P02452 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms