Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 AC093010.1-201ENST00000473625 1624 ntBASIC15.29■□□□□ 0.04
DHFRP00374 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DHFRP00374 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.29■□□□□ 0.04
DHFRP00374 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DHFRP00374 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.29■□□□□ 0.04
DHFRP00374 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
DHFRP00374 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.29■□□□□ 0.04
DHFRP00374 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.29■□□□□ 0.04
DHFRP00374 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DHFRP00374 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
DHFRP00374 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.29■□□□□ 0.04
DHFRP00374 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DHFRP00374 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.29■□□□□ 0.04
DHFRP00374 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.29■□□□□ 0.04
DHFRP00374 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.29■□□□□ 0.04
DHFRP00374 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DHFRP00374 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DHFRP00374 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.28■□□□□ 0.04
DHFRP00374 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DHFRP00374 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DHFRP00374 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
DHFRP00374 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.28■□□□□ 0.04
DHFRP00374 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.27■□□□□ 0.04
DHFRP00374 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
DHFRP00374 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 AC067930.6-201ENST00000623257 4947 ntBASIC15.27■□□□□ 0.04
DHFRP00374 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.27■□□□□ 0.04
DHFRP00374 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DHFRP00374 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
DHFRP00374 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DHFRP00374 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.27■□□□□ 0.04
DHFRP00374 AC026366.1-201ENST00000488803 879 ntBASIC15.27■□□□□ 0.04
DHFRP00374 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
DHFRP00374 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.27■□□□□ 0.04
DHFRP00374 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.27■□□□□ 0.04
DHFRP00374 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms