Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 AC139713.2-201ENST00000641328 2723 ntBASIC20.49■□□□□ 0.87
CDKL5O76039 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDKL5O76039 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKL5O76039 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.48■□□□□ 0.87
CDKL5O76039 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKL5O76039 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDKL5O76039 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDKL5O76039 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
CDKL5O76039 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.48■□□□□ 0.87
CDKL5O76039 TOB2P1-201ENST00000469761 992 ntBASIC20.48■□□□□ 0.87
CDKL5O76039 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.48■□□□□ 0.87
CDKL5O76039 AC091607.1-201ENST00000490318 1060 ntBASIC20.48■□□□□ 0.87
CDKL5O76039 AP005901.3-202ENST00000581653 237 ntBASIC20.48■□□□□ 0.87
CDKL5O76039 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.48■□□□□ 0.87
CDKL5O76039 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDKL5O76039 AL139327.4-201ENST00000612362 153 ntBASIC20.48■□□□□ 0.87
CDKL5O76039 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.48■□□□□ 0.87
CDKL5O76039 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKL5O76039 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 LYSMD4-203ENST00000378904 2122 ntBASIC20.48■□□□□ 0.87
CDKL5O76039 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.48■□□□□ 0.87
CDKL5O76039 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDKL5O76039 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKL5O76039 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CDKL5O76039 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDKL5O76039 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDKL5O76039 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.47■□□□□ 0.87
CDKL5O76039 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 AC019129.2-201ENST00000609837 1235 ntBASIC20.47■□□□□ 0.87
CDKL5O76039 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDKL5O76039 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CDKL5O76039 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKL5O76039 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.46■□□□□ 0.87
CDKL5O76039 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 SIRPAP1-201ENST00000448467 1770 ntBASIC20.46■□□□□ 0.87
CDKL5O76039 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 AL645608.8-201ENST00000606034 2086 ntBASIC20.46■□□□□ 0.87
CDKL5O76039 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 LINC00265-3P-201ENST00000447588 903 ntBASIC20.46■□□□□ 0.87
CDKL5O76039 KRT17P6-201ENST00000453795 1220 ntBASIC20.46■□□□□ 0.87
CDKL5O76039 MINOS1P3-201ENST00000457048 203 ntBASIC20.46■□□□□ 0.87
CDKL5O76039 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 AC111152.3-201ENST00000569699 673 ntBASIC20.46■□□□□ 0.87
CDKL5O76039 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.46■□□□□ 0.87
CDKL5O76039 CROCCP2-202ENST00000412962 2773 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms