Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.85■■□□□ 1.09
SRGAP3O43295 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.85■■□□□ 1.09
SRGAP3O43295 STK25P1-201ENST00000585406 838 ntBASIC21.85■■□□□ 1.09
SRGAP3O43295 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 AC104692.2-201ENST00000603054 253 ntBASIC21.85■■□□□ 1.09
SRGAP3O43295 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SRGAP3O43295 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
SRGAP3O43295 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.85■■□□□ 1.09
SRGAP3O43295 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.85■■□□□ 1.09
SRGAP3O43295 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.84■■□□□ 1.09
SRGAP3O43295 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.84■■□□□ 1.09
SRGAP3O43295 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SRGAP3O43295 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SRGAP3O43295 TP73-AS1-207ENST00000624167 988 ntBASIC21.84■■□□□ 1.09
SRGAP3O43295 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 AC079776.2-201ENST00000641154 1609 ntBASIC21.84■■□□□ 1.09
SRGAP3O43295 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SRGAP3O43295 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
SRGAP3O43295 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SRGAP3O43295 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.84■■□□□ 1.09
SRGAP3O43295 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.83■■□□□ 1.09
SRGAP3O43295 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.83■■□□□ 1.09
SRGAP3O43295 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
SRGAP3O43295 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.83■■□□□ 1.09
SRGAP3O43295 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SRGAP3O43295 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
SRGAP3O43295 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 SPDYE21P-201ENST00000413323 827 ntBASIC21.83■■□□□ 1.09
SRGAP3O43295 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SRGAP3O43295 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.83■■□□□ 1.09
SRGAP3O43295 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.83■■□□□ 1.09
SRGAP3O43295 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.83■■□□□ 1.09
SRGAP3O43295 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SRGAP3O43295 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.83■■□□□ 1.09
SRGAP3O43295 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SRGAP3O43295 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
SRGAP3O43295 AC004817.3-201ENST00000602957 2129 ntBASIC21.83■■□□□ 1.08
SRGAP3O43295 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
SRGAP3O43295 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SRGAP3O43295 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SRGAP3O43295 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.83■■□□□ 1.08
SRGAP3O43295 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SRGAP3O43295 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.83■■□□□ 1.08
SRGAP3O43295 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 HTR7P1-202ENST00000624664 4411 ntBASIC21.82■■□□□ 1.08
SRGAP3O43295 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.82■■□□□ 1.08
SRGAP3O43295 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 AC148477.5-201ENST00000625164 1645 ntBASIC21.82■■□□□ 1.08
SRGAP3O43295 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.82■■□□□ 1.08
SRGAP3O43295 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.82■■□□□ 1.08
SRGAP3O43295 SART3-203ENST00000546611 1184 ntBASIC21.82■■□□□ 1.08
SRGAP3O43295 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.82■■□□□ 1.08
SRGAP3O43295 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.82■■□□□ 1.08
SRGAP3O43295 NKAPP1-205ENST00000585790 367 ntBASIC21.82■■□□□ 1.08
SRGAP3O43295 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.82■■□□□ 1.08
SRGAP3O43295 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 AL356309.3-201ENST00000624132 1934 ntBASIC21.82■■□□□ 1.08
SRGAP3O43295 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SRGAP3O43295 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.82■■□□□ 1.08
SRGAP3O43295 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.82■■□□□ 1.08
SRGAP3O43295 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SRGAP3O43295 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.81■■□□□ 1.08
SRGAP3O43295 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.81■■□□□ 1.08
SRGAP3O43295 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms