Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 TSPY14P-201ENST00000303979 915 ntBASIC17.63■□□□□ 0.41
COPEO14579 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.63■□□□□ 0.41
COPEO14579 TSPY20P-201ENST00000450910 630 ntBASIC17.63■□□□□ 0.41
COPEO14579 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 AC018695.7-201ENST00000624587 2492 ntBASIC17.63■□□□□ 0.41
COPEO14579 LYSMD4-203ENST00000378904 2122 ntBASIC17.63■□□□□ 0.41
COPEO14579 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.63■□□□□ 0.41
COPEO14579 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.63■□□□□ 0.41
COPEO14579 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPEO14579 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.62■□□□□ 0.41
COPEO14579 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
COPEO14579 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COPEO14579 PCDHA14-201ENST00000506751 2298 ntBASIC17.62■□□□□ 0.41
COPEO14579 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COPEO14579 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COPEO14579 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.62■□□□□ 0.41
COPEO14579 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.62■□□□□ 0.41
COPEO14579 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.62■□□□□ 0.41
COPEO14579 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.62■□□□□ 0.41
COPEO14579 Z99916.2-201ENST00000604037 246 ntBASIC17.62■□□□□ 0.41
COPEO14579 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
COPEO14579 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COPEO14579 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.62■□□□□ 0.41
COPEO14579 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPEO14579 AC105020.1-201ENST00000435356 2205 ntBASIC17.62■□□□□ 0.41
COPEO14579 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COPEO14579 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.61■□□□□ 0.41
COPEO14579 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.61■□□□□ 0.41
COPEO14579 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.61■□□□□ 0.41
COPEO14579 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.61■□□□□ 0.41
COPEO14579 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COPEO14579 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.61■□□□□ 0.41
COPEO14579 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.61■□□□□ 0.41
COPEO14579 MIR4785-201ENST00000585005 73 ntBASIC17.61■□□□□ 0.41
COPEO14579 AL157888.1-201ENST00000631930 593 ntBASIC17.61■□□□□ 0.41
COPEO14579 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.61■□□□□ 0.41
COPEO14579 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms