Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PITPNM1O00562 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PITPNM1O00562 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
PITPNM1O00562 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PITPNM1O00562 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PITPNM1O00562 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PITPNM1O00562 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PITPNM1O00562 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PITPNM1O00562 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 FAM8A3P-201ENST00000427218 844 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 AL392088.1-201ENST00000428364 670 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 AC074386.1-202ENST00000463561 864 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PITPNM1O00562 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC19.19■□□□□ 0.66
PITPNM1O00562 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC19.19■□□□□ 0.66
PITPNM1O00562 AC092364.2-202ENST00000597012 1073 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PITPNM1O00562 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.19■□□□□ 0.66
PITPNM1O00562 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 BX276092.7-203ENST00000637198 1536 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.19■□□□□ 0.66
PITPNM1O00562 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PITPNM1O00562 AC009336.1-201ENST00000608941 1553 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 AC092964.1-201ENST00000623304 1399 ntBASIC19.19■□□□□ 0.66
PITPNM1O00562 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.18■□□□□ 0.66
PITPNM1O00562 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 MIR770-201ENST00000390219 98 ntBASIC19.18■□□□□ 0.66
PITPNM1O00562 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.18■□□□□ 0.66
PITPNM1O00562 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC19.18■□□□□ 0.66
PITPNM1O00562 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC19.18■□□□□ 0.66
PITPNM1O00562 IGHV3-52-201ENST00000519770 353 ntBASIC19.18■□□□□ 0.66
PITPNM1O00562 AP001981.1-201ENST00000531132 738 ntBASIC19.18■□□□□ 0.66
PITPNM1O00562 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.18■□□□□ 0.66
PITPNM1O00562 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.18■□□□□ 0.66
PITPNM1O00562 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.18■□□□□ 0.66
PITPNM1O00562 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.18■□□□□ 0.66
PITPNM1O00562 AC007064.4-201ENST00000637740 555 ntBASIC19.18■□□□□ 0.66
PITPNM1O00562 AC097637.2-201ENST00000624096 1997 ntBASIC19.18■□□□□ 0.66
PITPNM1O00562 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PITPNM1O00562 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PITPNM1O00562 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.18■□□□□ 0.66
PITPNM1O00562 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PITPNM1O00562 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PITPNM1O00562 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.17■□□□□ 0.66
PITPNM1O00562 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PITPNM1O00562 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms