Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 CROCCP5-201ENST00000436658 830 ntBASIC12.43□□□□□ -0.42
LINC01546A6NGU7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 HLA-A-202ENST00000376806 1854 ntBASIC12.42□□□□□ -0.42
LINC01546A6NGU7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 KRASP1-201ENST00000407852 552 ntBASIC12.42□□□□□ -0.42
LINC01546A6NGU7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 AC008403.3-201ENST00000598924 454 ntBASIC12.42□□□□□ -0.42
LINC01546A6NGU7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 AC069544.1-201ENST00000609399 999 ntBASIC12.42□□□□□ -0.42
LINC01546A6NGU7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01546A6NGU7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms