Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 MCCD1P2-201ENST00000423228 335 ntBASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 AL691403.2-201ENST00000618460 490 ntBASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC144AA2RUR9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 ALG1L5P-201ENST00000482043 771 ntBASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC144AA2RUR9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 GGTLC5P-201ENST00000617623 998 ntBASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC25.15■■□□□ 1.62
CCDC144AA2RUR9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 COA5-202ENST00000409997 557 ntTSL 4 BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 AL513190.1-201ENST00000621254 727 ntBASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 AC092865.6-201ENST00000642101 219 ntBASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
CCDC144AA2RUR9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC144AA2RUR9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CCDC144AA2RUR9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 HMGN1P19-201ENST00000436976 333 ntBASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 AC004967.1-201ENST00000453589 447 ntBASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 AC112482.1-201ENST00000492080 688 ntBASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 MTDHP5-201ENST00000598980 586 ntBASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC144AA2RUR9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms