Protein–RNA interactions for Protein: A0A0A0MS15

IGHV3-49, Immunoglobulin heavy variable 3-49, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49A0A0A0MS15 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 KRT18P65-201ENST00000439811 1286 ntBASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.67□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC087388.1-201ENST00000571370 1112 ntBASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 FLJ16779-201ENST00000612722 7638 ntBASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 KRT8P47-201ENST00000604727 1398 ntBASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGHV3-49A0A0A0MS15 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 AL390719.2-201ENST00000606993 987 ntBASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.65□□□□□ -0.22
IGHV3-49A0A0A0MS15 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IGHV3-49A0A0A0MS15 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms