Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 KRT8P7-201ENST00000533003 1432 ntBASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 AC060834.1-201ENST00000443027 2032 ntBASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 AL596257.1-201ENST00000641463 2694 ntBASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
USH1CQ9Y6N9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 CA15P1-201ENST00000481698 905 ntBASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 LINC01451-201ENST00000623792 534 ntBASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 AC073648.6-201ENST00000641589 218 ntBASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 PCDHA1-201ENST00000378133 2726 ntBASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USH1CQ9Y6N9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 AC132938.6-201ENST00000623828 1655 ntBASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 AL513477.1-201ENST00000602865 2407 ntBASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USH1CQ9Y6N9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 RARRES2P10-201ENST00000564312 460 ntBASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
USH1CQ9Y6N9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.57■□□□□ 0.4
USH1CQ9Y6N9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms