Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 LINC00896-202ENST00000609602 2128 ntBASIC19.34■□□□□ 0.69
USP20Q9Y2K6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 HNRNPDP1-201ENST00000439535 754 ntBASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AC019129.2-201ENST00000609837 1235 ntBASIC19.34■□□□□ 0.69
USP20Q9Y2K6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP20Q9Y2K6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
USP20Q9Y2K6 PCDHB18P-201ENST00000524813 2368 ntBASIC19.33■□□□□ 0.69
USP20Q9Y2K6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.33■□□□□ 0.69
USP20Q9Y2K6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
USP20Q9Y2K6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP20Q9Y2K6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 AC079776.4-201ENST00000511039 504 ntBASIC19.33■□□□□ 0.68
USP20Q9Y2K6 AC109462.3-201ENST00000573934 613 ntBASIC19.33■□□□□ 0.68
USP20Q9Y2K6 AL049840.3-201ENST00000602669 611 ntBASIC19.33■□□□□ 0.68
USP20Q9Y2K6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 AD001527.2-201ENST00000622994 785 ntBASIC19.33■□□□□ 0.68
USP20Q9Y2K6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.33■□□□□ 0.68
USP20Q9Y2K6 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.32■□□□□ 0.68
USP20Q9Y2K6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 BX005266.1-201ENST00000473402 457 ntBASIC19.32■□□□□ 0.68
USP20Q9Y2K6 AC122714.2-201ENST00000502787 707 ntBASIC19.32■□□□□ 0.68
USP20Q9Y2K6 NKAPP1-205ENST00000585790 367 ntBASIC19.32■□□□□ 0.68
USP20Q9Y2K6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 PMPCAP1-201ENST00000508114 1576 ntBASIC19.32■□□□□ 0.68
USP20Q9Y2K6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP20Q9Y2K6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 AC132938.5-201ENST00000624980 1813 ntBASIC19.31■□□□□ 0.68
USP20Q9Y2K6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 RNA5SP419-201ENST00000515908 135 ntBASIC19.31■□□□□ 0.68
USP20Q9Y2K6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 AC021087.4-201ENST00000563761 564 ntBASIC19.31■□□□□ 0.68
USP20Q9Y2K6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
USP20Q9Y2K6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms