Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NINLQ9Y2I6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NINLQ9Y2I6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 AL390961.4-201ENST00000623958 2535 ntBASIC24■■□□□ 1.43
NINLQ9Y2I6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC24■■□□□ 1.43
NINLQ9Y2I6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC24■■□□□ 1.43
NINLQ9Y2I6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 NMU-202ENST00000505262 693 ntTSL 3 BASIC24■■□□□ 1.43
NINLQ9Y2I6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC24■■□□□ 1.43
NINLQ9Y2I6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24■■□□□ 1.43
NINLQ9Y2I6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC24■■□□□ 1.43
NINLQ9Y2I6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC24■■□□□ 1.43
NINLQ9Y2I6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC24■■□□□ 1.43
NINLQ9Y2I6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC24■■□□□ 1.43
NINLQ9Y2I6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 AP002414.1-201ENST00000391405 1147 ntBASIC23.99■■□□□ 1.43
NINLQ9Y2I6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.99■■□□□ 1.43
NINLQ9Y2I6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 KRT18P3-201ENST00000451602 1288 ntBASIC23.99■■□□□ 1.43
NINLQ9Y2I6 HLA-J-203ENST00000494367 1087 ntBASIC23.99■■□□□ 1.43
NINLQ9Y2I6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NINLQ9Y2I6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 LINC00982-205ENST00000420957 435 ntBASIC23.98■■□□□ 1.43
NINLQ9Y2I6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 RNA5SP416-201ENST00000516838 111 ntBASIC23.98■■□□□ 1.43
NINLQ9Y2I6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 AC040169.1-201ENST00000565382 521 ntBASIC23.98■■□□□ 1.43
NINLQ9Y2I6 AC010327.4-202ENST00000591484 748 ntBASIC23.98■■□□□ 1.43
NINLQ9Y2I6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.98■■□□□ 1.43
NINLQ9Y2I6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 GPX1P2-201ENST00000429271 606 ntBASIC23.97■■□□□ 1.43
NINLQ9Y2I6 AC004967.1-201ENST00000453589 447 ntBASIC23.97■■□□□ 1.43
NINLQ9Y2I6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 AL139327.4-201ENST00000612362 153 ntBASIC23.97■■□□□ 1.43
NINLQ9Y2I6 AC046185.3-201ENST00000623228 1824 ntBASIC23.97■■□□□ 1.43
NINLQ9Y2I6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms