Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC009949.1-201ENST00000623048 1830 ntBASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 COX5BP2-201ENST00000392354 334 ntBASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AC103564.2-201ENST00000432853 1299 ntBASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 KRT16P4-201ENST00000453883 522 ntBASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AC091607.1-201ENST00000490318 1060 ntBASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SDHAF3Q9NRP4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 AC007967.3-201ENST00000434308 558 ntBASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 AC122714.2-201ENST00000502787 707 ntBASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 AC096582.2-201ENST00000510860 516 ntBASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 AC018470.1-201ENST00000624790 3129 ntBASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SDHAF3Q9NRP4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SDHAF3Q9NRP4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SDHAF3Q9NRP4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SDHAF3Q9NRP4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SDHAF3Q9NRP4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 AC011467.2-201ENST00000598425 242 ntBASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms