Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
PIF1Q9H611 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.88■□□□□ 0.29
PIF1Q9H611 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 C2orf69P3-201ENST00000565542 1120 ntBASIC16.88■□□□□ 0.29
PIF1Q9H611 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.88■□□□□ 0.29
PIF1Q9H611 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 AC024243.1-201ENST00000609234 778 ntBASIC16.88■□□□□ 0.29
PIF1Q9H611 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.88■□□□□ 0.29
PIF1Q9H611 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 HLA-J-201ENST00000462773 1622 ntBASIC16.88■□□□□ 0.29
PIF1Q9H611 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
PIF1Q9H611 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PIF1Q9H611 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PIF1Q9H611 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PIF1Q9H611 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.87■□□□□ 0.29
PIF1Q9H611 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
PIF1Q9H611 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.87■□□□□ 0.29
PIF1Q9H611 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 CCR12P-201ENST00000446203 998 ntBASIC16.87■□□□□ 0.29
PIF1Q9H611 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PIF1Q9H611 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.87■□□□□ 0.29
PIF1Q9H611 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.87■□□□□ 0.29
PIF1Q9H611 MIR3180-4-201ENST00000582223 153 ntBASIC16.87■□□□□ 0.29
PIF1Q9H611 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.87■□□□□ 0.29
PIF1Q9H611 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.87■□□□□ 0.29
PIF1Q9H611 AP000525.1-201ENST00000608286 694 ntBASIC16.87■□□□□ 0.29
PIF1Q9H611 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.87■□□□□ 0.29
PIF1Q9H611 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 REXO1L11P-201ENST00000620964 1927 ntBASIC16.87■□□□□ 0.29
PIF1Q9H611 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PIF1Q9H611 AC022898.2-201ENST00000616822 1312 ntBASIC16.87■□□□□ 0.29
PIF1Q9H611 AL118508.1-201ENST00000613502 2345 ntBASIC16.87■□□□□ 0.29
PIF1Q9H611 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PIF1Q9H611 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PIF1Q9H611 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.87■□□□□ 0.29
PIF1Q9H611 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PIF1Q9H611 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PIF1Q9H611 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.86■□□□□ 0.29
PIF1Q9H611 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PIF1Q9H611 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 AL121761.2-201ENST00000598007 1648 ntBASIC16.86■□□□□ 0.29
PIF1Q9H611 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PIF1Q9H611 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 MMP23A-201ENST00000234610 1017 ntBASIC16.86■□□□□ 0.29
PIF1Q9H611 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 AC007663.1-201ENST00000438948 1240 ntBASIC16.86■□□□□ 0.29
PIF1Q9H611 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.86■□□□□ 0.29
PIF1Q9H611 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.86■□□□□ 0.29
PIF1Q9H611 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms