Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 AC097493.4-201ENST00000641197 219 ntBASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NDUFAF3Q9BU61 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 FSCN1P1-201ENST00000568912 1481 ntBASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 AC024909.3-201ENST00000611513 2257 ntBASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 MIR1238-201ENST00000408483 83 ntBASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 AC116562.2-201ENST00000507042 360 ntBASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 HLA-A-209ENST00000638375 975 ntBASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
NDUFAF3Q9BU61 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 MIR1224-201ENST00000408193 85 ntBASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 NAPSB-206ENST00000562112 1266 ntBASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 AP000525.1-201ENST00000608286 694 ntBASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms