Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 SLC25A3P1-201ENST00000443844 931 ntBASIC26.33■■□□□ 1.81
CCER1Q8TC90 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 AC145285.6-201ENST00000604632 637 ntBASIC26.33■■□□□ 1.81
CCER1Q8TC90 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC26.33■■□□□ 1.81
CCER1Q8TC90 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCER1Q8TC90 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 SPDYE15P-201ENST00000424157 909 ntBASIC26.32■■□□□ 1.8
CCER1Q8TC90 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 LYSMD4-203ENST00000378904 2122 ntBASIC26.32■■□□□ 1.8
CCER1Q8TC90 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCER1Q8TC90 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CCER1Q8TC90 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 AC087499.1-201ENST00000418141 1075 ntBASIC26.31■■□□□ 1.8
CCER1Q8TC90 AC112698.1-201ENST00000510299 916 ntBASIC26.31■■□□□ 1.8
CCER1Q8TC90 AC009154.2-201ENST00000621177 724 ntBASIC26.31■■□□□ 1.8
CCER1Q8TC90 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CCER1Q8TC90 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCER1Q8TC90 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 TSPY12P-201ENST00000421279 868 ntBASIC26.3■■□□□ 1.8
CCER1Q8TC90 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
CCER1Q8TC90 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCER1Q8TC90 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC26.29■■□□□ 1.8
CCER1Q8TC90 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCER1Q8TC90 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms