Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.18■□□□□ 0.66
ZSWIM2Q8NEG5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 AC132938.5-201ENST00000624980 1813 ntBASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 EMBP1-201ENST00000458200 901 ntBASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 AL121772.3-201ENST00000610840 674 ntBASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZSWIM2Q8NEG5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 AC106820.2-201ENST00000563775 3264 ntBASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 AC139713.2-201ENST00000641328 2723 ntBASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 AF238378.1-201ENST00000526806 358 ntBASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 KRT126P-201ENST00000549467 1181 ntBASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 LYSMD4-203ENST00000378904 2122 ntBASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 AL353593.2-201ENST00000602529 1483 ntBASIC19.16■□□□□ 0.66
ZSWIM2Q8NEG5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 AL691432.3-201ENST00000621860 400 ntBASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 LINC01451-201ENST00000623792 534 ntBASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 AP000867.4-201ENST00000641616 219 ntBASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZSWIM2Q8NEG5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms