Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CA15P1-201ENST00000481698 905 ntBASIC17.18■□□□□ 0.34
HIPK4Q8NE63 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 AC116562.2-201ENST00000507042 360 ntBASIC17.18■□□□□ 0.34
HIPK4Q8NE63 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 SDHAP2-201ENST00000455183 2001 ntBASIC17.18■□□□□ 0.34
HIPK4Q8NE63 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIPK4Q8NE63 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 NUDT16P1-203ENST00000513809 620 ntBASIC17.17■□□□□ 0.34
HIPK4Q8NE63 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 MIR3180-5-201ENST00000583743 153 ntBASIC17.17■□□□□ 0.34
HIPK4Q8NE63 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.17■□□□□ 0.34
HIPK4Q8NE63 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.16■□□□□ 0.34
HIPK4Q8NE63 AC068418.2-201ENST00000577309 3703 ntBASIC17.16■□□□□ 0.34
HIPK4Q8NE63 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms