Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 SCARNA2-201ENST00000458748 420 ntBASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 RNPS1P1-201ENST00000507437 918 ntBASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 IGHV3-52-201ENST00000519770 353 ntBASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 AC009336.1-201ENST00000608941 1553 ntBASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 AC133963.1-201ENST00000504166 1679 ntBASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARHGEF39Q8N4T4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 AC004817.3-201ENST00000602957 2129 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 MYCLP1-201ENST00000372451 1075 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 AL020989.1-201ENST00000422979 469 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 BX005266.1-201ENST00000473402 457 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 HLA-A-201ENST00000376802 1334 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 AC134043.2-201ENST00000624206 2238 ntBASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ARHGEF39Q8N4T4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 KLF4P1-201ENST00000412782 1185 ntBASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 AL022326.1-202ENST00000641533 845 ntBASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARHGEF39Q8N4T4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ARHGEF39Q8N4T4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms