Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST3H2AQ7L7L0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 AL355312.1-201ENST00000407115 2176 ntBASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST3H2AQ7L7L0 SIRPAP1-201ENST00000448467 1770 ntBASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST3H2AQ7L7L0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms