Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT39Q6A163 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
KRT39Q6A163 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
KRT39Q6A163 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT39Q6A163 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT39Q6A163 AC019129.2-201ENST00000609837 1235 ntBASIC19.05■□□□□ 0.64
KRT39Q6A163 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
KRT39Q6A163 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT39Q6A163 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT39Q6A163 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT39Q6A163 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT39Q6A163 SIRPAP1-201ENST00000448467 1770 ntBASIC19.04■□□□□ 0.64
KRT39Q6A163 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
KRT39Q6A163 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT39Q6A163 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT39Q6A163 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT39Q6A163 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT39Q6A163 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT39Q6A163 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT39Q6A163 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.04■□□□□ 0.64
KRT39Q6A163 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT39Q6A163 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT39Q6A163 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
KRT39Q6A163 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT39Q6A163 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
KRT39Q6A163 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT39Q6A163 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KRT39Q6A163 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT39Q6A163 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
KRT39Q6A163 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT39Q6A163 POM121L3P-201ENST00000419331 1163 ntBASIC19.03■□□□□ 0.64
KRT39Q6A163 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT39Q6A163 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT39Q6A163 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
KRT39Q6A163 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT39Q6A163 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT39Q6A163 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT39Q6A163 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT39Q6A163 LYSMD4-203ENST00000378904 2122 ntBASIC19.03■□□□□ 0.64
KRT39Q6A163 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT39Q6A163 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
KRT39Q6A163 AL049757.1-201ENST00000616842 1596 ntBASIC19.02■□□□□ 0.64
KRT39Q6A163 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT39Q6A163 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT39Q6A163 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT39Q6A163 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.02■□□□□ 0.64
KRT39Q6A163 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 MYCLP1-201ENST00000372451 1075 ntBASIC19.02■□□□□ 0.64
KRT39Q6A163 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRT39Q6A163 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
KRT39Q6A163 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT39Q6A163 AC096582.2-201ENST00000510860 516 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms