Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 AL136379.1-201ENST00000623471 2642 ntBASIC16.66■□□□□ 0.26
LPCAT4Q643R3 AC131212.4-201ENST00000623606 975 ntBASIC16.66■□□□□ 0.26
LPCAT4Q643R3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 AC004980.1-204ENST00000429707 299 ntBASIC16.65■□□□□ 0.26
LPCAT4Q643R3 AC026185.1-201ENST00000445748 174 ntBASIC16.65■□□□□ 0.26
LPCAT4Q643R3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 MYC-209ENST00000641252 345 ntBASIC16.65■□□□□ 0.26
LPCAT4Q643R3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LPCAT4Q643R3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.64■□□□□ 0.26
LPCAT4Q643R3 LYSMD4-203ENST00000378904 2122 ntBASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC016396.2-201ENST00000562575 1417 ntBASIC16.64■□□□□ 0.25
LPCAT4Q643R3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC009949.1-201ENST00000623048 1830 ntBASIC16.64■□□□□ 0.25
LPCAT4Q643R3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AL137784.2-201ENST00000607332 1000 ntBASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT4Q643R3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms