Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TTC39BQ5VTQ0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
TTC39BQ5VTQ0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TTC39BQ5VTQ0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TTC39BQ5VTQ0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TTC39BQ5VTQ0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 KRT18P31-201ENST00000506277 1292 ntBASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 AC091304.2-201ENST00000564639 760 ntBASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 AC116407.2-201ENST00000613639 860 ntBASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 AC012317.2-201ENST00000623305 2251 ntBASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC39BQ5VTQ0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC39BQ5VTQ0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 NUS1P2-201ENST00000417358 873 ntBASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 AC096633.1-201ENST00000422446 749 ntBASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 AC139713.2-201ENST00000641328 2723 ntBASIC18.37■□□□□ 0.53
TTC39BQ5VTQ0 KRT8P47-201ENST00000604727 1398 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms