Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CERKLQ49MI3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.57■□□□□ 0.88
CERKLQ49MI3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 AC005104.2-201ENST00000427818 678 ntBASIC20.56■□□□□ 0.88
CERKLQ49MI3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 RPS15P9-201ENST00000494093 319 ntBASIC20.56■□□□□ 0.88
CERKLQ49MI3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CERKLQ49MI3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CERKLQ49MI3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 AC008667.4-201ENST00000607370 168 ntBASIC20.55■□□□□ 0.88
CERKLQ49MI3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CERKLQ49MI3 ABALON-201ENST00000629058 1903 ntBASIC20.55■□□□□ 0.88
CERKLQ49MI3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CERKLQ49MI3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 YBX2P1-201ENST00000394192 760 ntBASIC20.54■□□□□ 0.88
CERKLQ49MI3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 UPF3AP3-201ENST00000420996 769 ntBASIC20.54■□□□□ 0.88
CERKLQ49MI3 AC108073.2-201ENST00000464002 357 ntBASIC20.54■□□□□ 0.88
CERKLQ49MI3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CERKLQ49MI3 IGHV3-65-201ENST00000523210 341 ntBASIC20.54■□□□□ 0.88
CERKLQ49MI3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 AC010327.4-202ENST00000591484 748 ntBASIC20.54■□□□□ 0.88
CERKLQ49MI3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.54■□□□□ 0.88
CERKLQ49MI3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms