Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 AC109635.5-201ENST00000533593 962 ntBASIC30.68■■■□□ 2.5
HMGXB3Q12766 CD7-202ENST00000578509 925 ntTSL 3 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC30.68■■■□□ 2.5
HMGXB3Q12766 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HMGXB3Q12766 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
HMGXB3Q12766 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
HMGXB3Q12766 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 AC126763.1-201ENST00000552015 2118 ntBASIC30.67■■■□□ 2.5
HMGXB3Q12766 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
HMGXB3Q12766 PIN1P1-201ENST00000412108 996 ntBASIC30.67■■■□□ 2.5
HMGXB3Q12766 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 ATP5G2P4-201ENST00000442175 420 ntBASIC30.67■■■□□ 2.5
HMGXB3Q12766 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 TMPRSS11CP-201ENST00000453277 683 ntBASIC30.67■■■□□ 2.5
HMGXB3Q12766 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
HMGXB3Q12766 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HMGXB3Q12766 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC30.67■■■□□ 2.5
HMGXB3Q12766 AL031598.1-201ENST00000561511 1773 ntBASIC30.66■■■□□ 2.5
HMGXB3Q12766 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 ARSEP1-201ENST00000420443 635 ntBASIC30.66■■■□□ 2.5
HMGXB3Q12766 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 SSH2-211ENST00000590153 570 ntTSL 4 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC30.66■■■□□ 2.5
HMGXB3Q12766 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HMGXB3Q12766 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 AC241585.1-201ENST00000433527 519 ntBASIC30.65■■■□□ 2.5
HMGXB3Q12766 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC30.65■■■□□ 2.5
HMGXB3Q12766 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC30.65■■■□□ 2.5
HMGXB3Q12766 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HMGXB3Q12766 AC073592.3-201ENST00000625118 1834 ntBASIC30.65■■■□□ 2.5
HMGXB3Q12766 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
HMGXB3Q12766 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC30.64■■■□□ 2.5
HMGXB3Q12766 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC30.64■■■□□ 2.5
HMGXB3Q12766 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HMGXB3Q12766 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HMGXB3Q12766 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
HMGXB3Q12766 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC30.64■■■□□ 2.5
HMGXB3Q12766 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HMGXB3Q12766 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
HMGXB3Q12766 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HMGXB3Q12766 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
HMGXB3Q12766 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
HMGXB3Q12766 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC30.64■■■□□ 2.49
HMGXB3Q12766 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
HMGXB3Q12766 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 ALG1L8P-201ENST00000533887 760 ntBASIC30.63■■■□□ 2.49
HMGXB3Q12766 AC010336.2-201ENST00000564226 506 ntBASIC30.63■■■□□ 2.49
HMGXB3Q12766 AC100757.3-201ENST00000622361 1406 ntBASIC30.63■■■□□ 2.49
HMGXB3Q12766 CU639417.3-201ENST00000624240 1404 ntBASIC30.63■■■□□ 2.49
HMGXB3Q12766 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMGXB3Q12766 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 SPTLC1P1-201ENST00000447199 261 ntBASIC30.63■■■□□ 2.49
HMGXB3Q12766 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC30.63■■■□□ 2.49
HMGXB3Q12766 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms