Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CACNB3P54284 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.8■□□□□ 0.92
CACNB3P54284 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.8■□□□□ 0.92
CACNB3P54284 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.8■□□□□ 0.92
CACNB3P54284 AC010654.1-201ENST00000615722 808 ntBASIC20.8■□□□□ 0.92
CACNB3P54284 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CACNB3P54284 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CACNB3P54284 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 AC004408.2-201ENST00000623613 2777 ntBASIC20.79■□□□□ 0.92
CACNB3P54284 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.79■□□□□ 0.92
CACNB3P54284 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.79■□□□□ 0.92
CACNB3P54284 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.79■□□□□ 0.92
CACNB3P54284 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.79■□□□□ 0.92
CACNB3P54284 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.79■□□□□ 0.92
CACNB3P54284 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.79■□□□□ 0.92
CACNB3P54284 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.79■□□□□ 0.92
CACNB3P54284 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.79■□□□□ 0.92
CACNB3P54284 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CACNB3P54284 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.79■□□□□ 0.92
CACNB3P54284 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.79■□□□□ 0.92
CACNB3P54284 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CACNB3P54284 BCAR1-209ENST00000546196 1340 ntBASIC20.78■□□□□ 0.92
CACNB3P54284 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CACNB3P54284 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CACNB3P54284 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CACNB3P54284 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.78■□□□□ 0.92
CACNB3P54284 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNB3P54284 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.78■□□□□ 0.92
CACNB3P54284 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.78■□□□□ 0.92
CACNB3P54284 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.78■□□□□ 0.92
CACNB3P54284 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CACNB3P54284 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CACNB3P54284 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CACNB3P54284 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNB3P54284 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNB3P54284 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CACNB3P54284 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.77■□□□□ 0.92
CACNB3P54284 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 CEND1P1-201ENST00000451006 455 ntBASIC20.77■□□□□ 0.92
CACNB3P54284 KRT19P2-202ENST00000557173 1012 ntBASIC20.77■□□□□ 0.92
CACNB3P54284 AL031432.2-201ENST00000566714 459 ntBASIC20.77■□□□□ 0.92
CACNB3P54284 AL928711.1-201ENST00000570165 459 ntBASIC20.77■□□□□ 0.92
CACNB3P54284 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.77■□□□□ 0.92
CACNB3P54284 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
CACNB3P54284 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.77■□□□□ 0.92
CACNB3P54284 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CACNB3P54284 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CACNB3P54284 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CACNB3P54284 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.77■□□□□ 0.91
CACNB3P54284 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNB3P54284 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.76■□□□□ 0.91
CACNB3P54284 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CACNB3P54284 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms