Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLCN3P51790 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCN3P51790 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCN3P51790 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCN3P51790 SIGLEC30P-201ENST00000455569 941 ntBASIC19.34■□□□□ 0.69
CLCN3P51790 AC002558.1-201ENST00000488906 803 ntBASIC19.34■□□□□ 0.69
CLCN3P51790 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.34■□□□□ 0.69
CLCN3P51790 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 AC140113.2-201ENST00000604370 208 ntBASIC19.34■□□□□ 0.69
CLCN3P51790 AL589182.2-201ENST00000619332 1049 ntBASIC19.34■□□□□ 0.69
CLCN3P51790 MIR1199-201ENST00000621445 119 ntBASIC19.34■□□□□ 0.69
CLCN3P51790 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CLCN3P51790 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLCN3P51790 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN3P51790 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CLCN3P51790 AC135050.7-201ENST00000624508 2218 ntBASIC19.33■□□□□ 0.69
CLCN3P51790 REXO1L11P-201ENST00000620964 1927 ntBASIC19.33■□□□□ 0.69
CLCN3P51790 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CLCN3P51790 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCN3P51790 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLCN3P51790 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN3P51790 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCN3P51790 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.33■□□□□ 0.69
CLCN3P51790 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCN3P51790 AC009336.1-201ENST00000608941 1553 ntBASIC19.33■□□□□ 0.69
CLCN3P51790 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCN3P51790 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCN3P51790 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCN3P51790 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.33■□□□□ 0.68
CLCN3P51790 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCN3P51790 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 AC004706.3-202ENST00000621574 984 ntBASIC19.33■□□□□ 0.68
CLCN3P51790 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCN3P51790 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLCN3P51790 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLCN3P51790 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCN3P51790 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 AC006504.4-201ENST00000592118 1568 ntBASIC19.32■□□□□ 0.68
CLCN3P51790 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.32■□□□□ 0.68
CLCN3P51790 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLCN3P51790 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.32■□□□□ 0.68
CLCN3P51790 MED15P5-201ENST00000423150 992 ntBASIC19.32■□□□□ 0.68
CLCN3P51790 AC009947.1-201ENST00000444350 727 ntBASIC19.32■□□□□ 0.68
CLCN3P51790 AC136632.2-201ENST00000512891 861 ntBASIC19.32■□□□□ 0.68
CLCN3P51790 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.32■□□□□ 0.68
CLCN3P51790 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 AC027601.4-201ENST00000611259 610 ntBASIC19.32■□□□□ 0.68
CLCN3P51790 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLCN3P51790 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCN3P51790 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCN3P51790 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 PMS2P7-201ENST00000506558 1336 ntBASIC19.31■□□□□ 0.68
CLCN3P51790 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCN3P51790 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCN3P51790 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCN3P51790 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms