Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC1A6P48664 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A6P48664 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A6P48664 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A6P48664 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SLC1A6P48664 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A6P48664 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A6P48664 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC1A6P48664 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A6P48664 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC1A6P48664 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC1A6P48664 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC1A6P48664 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 FLJ38576-201ENST00000623820 2459 ntBASIC17.36■□□□□ 0.37
SLC1A6P48664 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 AL158047.1-201ENST00000445918 881 ntBASIC17.36■□□□□ 0.37
SLC1A6P48664 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A6P48664 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.36■□□□□ 0.37
SLC1A6P48664 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC1A6P48664 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.36■□□□□ 0.37
SLC1A6P48664 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A6P48664 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A6P48664 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SLC1A6P48664 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC1A6P48664 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC1A6P48664 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.35■□□□□ 0.37
SLC1A6P48664 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SLC1A6P48664 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A6P48664 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A6P48664 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A6P48664 AC098590.1-201ENST00000468126 897 ntBASIC17.35■□□□□ 0.37
SLC1A6P48664 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A6P48664 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 AC116353.5-201ENST00000638148 1699 ntBASIC17.35■□□□□ 0.37
SLC1A6P48664 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A6P48664 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A6P48664 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A6P48664 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A6P48664 TSPY14P-201ENST00000303979 915 ntBASIC17.34■□□□□ 0.37
SLC1A6P48664 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A6P48664 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC1A6P48664 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC1A6P48664 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms