Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.87■□□□□ 0.45
HADHAP40939 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
HADHAP40939 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.87■□□□□ 0.45
HADHAP40939 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.87■□□□□ 0.45
HADHAP40939 AL121672.3-201ENST00000608644 468 ntBASIC17.87■□□□□ 0.45
HADHAP40939 LINC01451-201ENST00000623792 534 ntBASIC17.87■□□□□ 0.45
HADHAP40939 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.87■□□□□ 0.45
HADHAP40939 AC141586.5-201ENST00000624546 2050 ntBASIC17.87■□□□□ 0.45
HADHAP40939 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 AC108860.2-201ENST00000562760 2183 ntBASIC17.87■□□□□ 0.45
HADHAP40939 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.86■□□□□ 0.45
HADHAP40939 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HADHAP40939 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.86■□□□□ 0.45
HADHAP40939 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.86■□□□□ 0.45
HADHAP40939 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.86■□□□□ 0.45
HADHAP40939 IGHV3-41-201ENST00000613121 348 ntBASIC17.86■□□□□ 0.45
HADHAP40939 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
HADHAP40939 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 IER3-202ENST00000376377 1350 ntBASIC17.86■□□□□ 0.45
HADHAP40939 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
HADHAP40939 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.86■□□□□ 0.45
HADHAP40939 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
HADHAP40939 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.86■□□□□ 0.45
HADHAP40939 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HADHAP40939 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
HADHAP40939 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 PP12613-201ENST00000424958 2230 ntBASIC17.85■□□□□ 0.45
HADHAP40939 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 DDX43P3-201ENST00000441064 443 ntBASIC17.85■□□□□ 0.45
HADHAP40939 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 HLA-J-201ENST00000462773 1622 ntBASIC17.85■□□□□ 0.45
HADHAP40939 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HADHAP40939 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HADHAP40939 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.85■□□□□ 0.45
HADHAP40939 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HADHAP40939 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.85■□□□□ 0.45
HADHAP40939 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.85■□□□□ 0.45
HADHAP40939 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.85■□□□□ 0.45
HADHAP40939 KRT8P47-201ENST00000604727 1398 ntBASIC17.85■□□□□ 0.45
HADHAP40939 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HADHAP40939 AC091076.1-201ENST00000610741 619 ntBASIC17.85■□□□□ 0.45
HADHAP40939 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.85■□□□□ 0.45
HADHAP40939 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms