Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HMGCLP35914 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCLP35914 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 PMPCAP1-201ENST00000508114 1576 ntBASIC17.55■□□□□ 0.4
HMGCLP35914 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCLP35914 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCLP35914 ABCD1P5-201ENST00000445663 754 ntBASIC17.55■□□□□ 0.4
HMGCLP35914 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGCLP35914 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 AP000867.4-201ENST00000641616 219 ntBASIC17.55■□□□□ 0.4
HMGCLP35914 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMGCLP35914 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
HMGCLP35914 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCLP35914 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCLP35914 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCLP35914 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGCLP35914 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 LYSMD4-203ENST00000378904 2122 ntBASIC17.54■□□□□ 0.4
HMGCLP35914 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HMGCLP35914 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGCLP35914 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.54■□□□□ 0.4
HMGCLP35914 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.54■□□□□ 0.4
HMGCLP35914 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGCLP35914 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.54■□□□□ 0.4
HMGCLP35914 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
HMGCLP35914 STK25P1-201ENST00000585406 838 ntBASIC17.54■□□□□ 0.4
HMGCLP35914 AL139327.4-201ENST00000612362 153 ntBASIC17.54■□□□□ 0.4
HMGCLP35914 AC012313.10-201ENST00000623509 926 ntBASIC17.54■□□□□ 0.4
HMGCLP35914 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
HMGCLP35914 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLP35914 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HMGCLP35914 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLP35914 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCLP35914 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HMGCLP35914 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HMGCLP35914 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 AC132008.2-207ENST00000454517 770 ntBASIC17.53■□□□□ 0.4
HMGCLP35914 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLP35914 HCG11-201ENST00000411553 5696 ntBASIC17.53■□□□□ 0.4
HMGCLP35914 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLP35914 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms