Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PNMA6B-201ENST00000538162 1200 ntBASIC15.66■□□□□ 0.1
CD40LGP29965 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.66■□□□□ 0.1
CD40LGP29965 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.66■□□□□ 0.1
CD40LGP29965 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.66■□□□□ 0.1
CD40LGP29965 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CD40LGP29965 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.66■□□□□ 0.1
CD40LGP29965 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 DBET-201ENST00000630918 3363 ntBASIC15.66■□□□□ 0.1
CD40LGP29965 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
CD40LGP29965 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CD40LGP29965 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40LGP29965 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.65■□□□□ 0.1
CD40LGP29965 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD40LGP29965 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD40LGP29965 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CD40LGP29965 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CD40LGP29965 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD40LGP29965 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CD40LGP29965 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.65■□□□□ 0.1
CD40LGP29965 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CD40LGP29965 GPAT2P1-201ENST00000444924 1672 ntBASIC15.65■□□□□ 0.1
CD40LGP29965 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 AC116353.5-201ENST00000638148 1699 ntBASIC15.65■□□□□ 0.1
CD40LGP29965 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.65■□□□□ 0.1
CD40LGP29965 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.65■□□□□ 0.1
CD40LGP29965 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.65■□□□□ 0.1
CD40LGP29965 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.65■□□□□ 0.1
CD40LGP29965 KRT18P6-201ENST00000555540 1265 ntBASIC15.65■□□□□ 0.1
CD40LGP29965 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.65■□□□□ 0.1
CD40LGP29965 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.65■□□□□ 0.1
CD40LGP29965 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CD40LGP29965 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.65■□□□□ 0.1
CD40LGP29965 AC092171.3-201ENST00000610122 2651 ntBASIC15.65■□□□□ 0.1
CD40LGP29965 AL662844.4-201ENST00000606367 2838 ntBASIC15.65■□□□□ 0.1
CD40LGP29965 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD40LGP29965 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD40LGP29965 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CD40LGP29965 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 RCC2P3-201ENST00000418112 1537 ntBASIC15.64■□□□□ 0.09
CD40LGP29965 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CD40LGP29965 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.64■□□□□ 0.09
CD40LGP29965 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CD40LGP29965 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CD40LGP29965 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.64■□□□□ 0.09
CD40LGP29965 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.64■□□□□ 0.09
CD40LGP29965 RPS2P52-201ENST00000469610 820 ntBASIC15.64■□□□□ 0.09
CD40LGP29965 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.64■□□□□ 0.09
CD40LGP29965 AC016396.2-201ENST00000562575 1417 ntBASIC15.64■□□□□ 0.09
CD40LGP29965 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.64■□□□□ 0.09
CD40LGP29965 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.64■□□□□ 0.09
CD40LGP29965 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 AC083880.1-201ENST00000608266 535 ntBASIC15.64■□□□□ 0.09
CD40LGP29965 LINC01451-201ENST00000623792 534 ntBASIC15.64■□□□□ 0.09
CD40LGP29965 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CD40LGP29965 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CD40LGP29965 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.64■□□□□ 0.09
CD40LGP29965 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD40LGP29965 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms