Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16■□□□□ 0.15
GDF1P27539 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16■□□□□ 0.15
GDF1P27539 RNPS1P1-201ENST00000507437 918 ntBASIC16■□□□□ 0.15
GDF1P27539 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16■□□□□ 0.15
GDF1P27539 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16■□□□□ 0.15
GDF1P27539 SART3-203ENST00000546611 1184 ntBASIC16■□□□□ 0.15
GDF1P27539 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16■□□□□ 0.15
GDF1P27539 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16■□□□□ 0.15
GDF1P27539 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16■□□□□ 0.15
GDF1P27539 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16■□□□□ 0.15
GDF1P27539 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16■□□□□ 0.15
GDF1P27539 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
GDF1P27539 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16■□□□□ 0.15
GDF1P27539 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
GDF1P27539 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16■□□□□ 0.15
GDF1P27539 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GDF1P27539 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16■□□□□ 0.15
GDF1P27539 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.99■□□□□ 0.15
GDF1P27539 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.99■□□□□ 0.15
GDF1P27539 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.99■□□□□ 0.15
GDF1P27539 AC093909.1-201ENST00000504731 1122 ntBASIC15.99■□□□□ 0.15
GDF1P27539 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.99■□□□□ 0.15
GDF1P27539 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GDF1P27539 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.99■□□□□ 0.15
GDF1P27539 AC073592.5-201ENST00000624854 528 ntBASIC15.99■□□□□ 0.15
GDF1P27539 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.99■□□□□ 0.15
GDF1P27539 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GDF1P27539 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 AC135050.7-201ENST00000624508 2218 ntBASIC15.99■□□□□ 0.15
GDF1P27539 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.99■□□□□ 0.15
GDF1P27539 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GDF1P27539 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 HLA-A-201ENST00000376802 1334 ntBASIC15.98■□□□□ 0.15
GDF1P27539 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.98■□□□□ 0.15
GDF1P27539 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.98■□□□□ 0.15
GDF1P27539 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.98■□□□□ 0.15
GDF1P27539 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
GDF1P27539 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GDF1P27539 AL354751.1-201ENST00000412768 1863 ntBASIC15.98■□□□□ 0.15
GDF1P27539 AL031284.1-201ENST00000419297 478 ntBASIC15.98■□□□□ 0.15
GDF1P27539 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.98■□□□□ 0.15
GDF1P27539 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms