Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RFX1P22670 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX1P22670 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX1P22670 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX1P22670 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.23■□□□□ 0.67
RFX1P22670 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.23■□□□□ 0.67
RFX1P22670 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.23■□□□□ 0.67
RFX1P22670 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX1P22670 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFX1P22670 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX1P22670 IGHV3-41-201ENST00000613121 348 ntBASIC19.23■□□□□ 0.67
RFX1P22670 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.23■□□□□ 0.67
RFX1P22670 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFX1P22670 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
RFX1P22670 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RFX1P22670 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RFX1P22670 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX1P22670 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX1P22670 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 AL353692.3-201ENST00000407031 1396 ntBASIC19.22■□□□□ 0.67
RFX1P22670 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
RFX1P22670 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFX1P22670 AC112698.1-201ENST00000510299 916 ntBASIC19.22■□□□□ 0.67
RFX1P22670 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.22■□□□□ 0.67
RFX1P22670 AC099336.1-202ENST00000602961 463 ntBASIC19.22■□□□□ 0.67
RFX1P22670 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.22■□□□□ 0.67
RFX1P22670 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RFX1P22670 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.22■□□□□ 0.67
RFX1P22670 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFX1P22670 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RFX1P22670 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX1P22670 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX1P22670 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX1P22670 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 AC106795.1-205ENST00000512851 1056 ntBASIC19.21■□□□□ 0.67
RFX1P22670 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX1P22670 AC139530.3-201ENST00000620344 690 ntBASIC19.21■□□□□ 0.67
RFX1P22670 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFX1P22670 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX1P22670 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RFX1P22670 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX1P22670 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX1P22670 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RFX1P22670 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.2■□□□□ 0.66
RFX1P22670 PMS2P1-201ENST00000431037 1228 ntBASIC19.2■□□□□ 0.66
RFX1P22670 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX1P22670 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX1P22670 Z69720.1-201ENST00000601483 472 ntBASIC19.2■□□□□ 0.66
RFX1P22670 AC064862.7-201ENST00000604520 867 ntBASIC19.2■□□□□ 0.66
RFX1P22670 AL353801.3-201ENST00000609898 542 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms