Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ATP2A2P16615 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 LINC00602-201ENST00000629776 2065 ntBASIC19.49■□□□□ 0.71
ATP2A2P16615 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP2A2P16615 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP2A2P16615 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP2A2P16615 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
ATP2A2P16615 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP2A2P16615 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP2A2P16615 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A2P16615 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A2P16615 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP2A2P16615 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A2P16615 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP2A2P16615 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.48■□□□□ 0.71
ATP2A2P16615 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP2A2P16615 AC064836.3-201ENST00000607928 673 ntBASIC19.48■□□□□ 0.71
ATP2A2P16615 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP2A2P16615 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.48■□□□□ 0.71
ATP2A2P16615 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A2P16615 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A2P16615 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP2A2P16615 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP2A2P16615 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 AC090164.3-201ENST00000610780 2143 ntBASIC19.48■□□□□ 0.71
ATP2A2P16615 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP2A2P16615 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
ATP2A2P16615 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 CYMP-203ENST00000474680 1263 ntBASIC19.47■□□□□ 0.71
ATP2A2P16615 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
ATP2A2P16615 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP2A2P16615 SNHG9-202ENST00000564014 471 ntBASIC19.47■□□□□ 0.71
ATP2A2P16615 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 MIR1199-201ENST00000621445 119 ntBASIC19.47■□□□□ 0.71
ATP2A2P16615 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 WIZP1-201ENST00000531444 2299 ntBASIC19.47■□□□□ 0.71
ATP2A2P16615 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP2A2P16615 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP2A2P16615 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP2A2P16615 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP2A2P16615 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A2P16615 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A2P16615 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A2P16615 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms