Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC29.88■■■□□ 2.37
CFTRP13569 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC29.88■■■□□ 2.37
CFTRP13569 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CFTRP13569 GATD1-206ENST00000526325 756 ntTSL 5 BASIC29.88■■■□□ 2.37
CFTRP13569 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC29.88■■■□□ 2.37
CFTRP13569 DUX4L17-201ENST00000557360 1267 ntBASIC29.88■■■□□ 2.37
CFTRP13569 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CFTRP13569 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC29.88■■■□□ 2.37
CFTRP13569 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC29.88■■■□□ 2.37
CFTRP13569 AL135999.2-201ENST00000622438 1686 ntBASIC29.88■■■□□ 2.37
CFTRP13569 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC29.88■■■□□ 2.37
CFTRP13569 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CFTRP13569 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CFTRP13569 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 GOLGA6L11P-201ENST00000417252 1298 ntBASIC29.87■■■□□ 2.37
CFTRP13569 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC29.87■■■□□ 2.37
CFTRP13569 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC29.87■■■□□ 2.37
CFTRP13569 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC29.87■■■□□ 2.37
CFTRP13569 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
CFTRP13569 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
CFTRP13569 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC29.87■■■□□ 2.37
CFTRP13569 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CFTRP13569 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC29.87■■■□□ 2.37
CFTRP13569 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC29.87■■■□□ 2.37
CFTRP13569 COQ6-210ENST00000554920 649 ntTSL 3 BASIC29.87■■■□□ 2.37
CFTRP13569 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC29.86■■■□□ 2.37
CFTRP13569 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
CFTRP13569 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CFTRP13569 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
CFTRP13569 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CFTRP13569 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CFTRP13569 AC093677.2-201ENST00000600169 1863 ntBASIC29.86■■■□□ 2.37
CFTRP13569 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC29.86■■■□□ 2.37
CFTRP13569 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC29.86■■■□□ 2.37
CFTRP13569 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC29.86■■■□□ 2.37
CFTRP13569 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CFTRP13569 OR8S1-201ENST00000310194 1080 ntBASIC29.86■■■□□ 2.37
CFTRP13569 COX5BP8-201ENST00000416911 349 ntBASIC29.86■■■□□ 2.37
CFTRP13569 PPP6R2P1-201ENST00000450880 1275 ntBASIC29.86■■■□□ 2.37
CFTRP13569 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC29.86■■■□□ 2.37
CFTRP13569 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CFTRP13569 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CFTRP13569 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CFTRP13569 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CFTRP13569 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CFTRP13569 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
CFTRP13569 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC29.85■■■□□ 2.37
CFTRP13569 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC29.85■■■□□ 2.37
CFTRP13569 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CFTRP13569 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC29.85■■■□□ 2.37
CFTRP13569 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC29.85■■■□□ 2.37
CFTRP13569 CR383656.12-201ENST00000549567 513 ntBASIC29.85■■■□□ 2.37
CFTRP13569 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC29.85■■■□□ 2.37
CFTRP13569 AC116562.4-201ENST00000641316 2276 ntBASIC29.85■■■□□ 2.37
CFTRP13569 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CFTRP13569 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
CFTRP13569 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC29.84■■■□□ 2.37
CFTRP13569 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CFTRP13569 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CFTRP13569 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CFTRP13569 EDF1-203ENST00000371649 790 ntTSL 2 BASIC29.84■■■□□ 2.37
CFTRP13569 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
CFTRP13569 AC004890.2-204ENST00000481968 304 ntBASIC29.84■■■□□ 2.37
CFTRP13569 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC29.84■■■□□ 2.37
CFTRP13569 KRT8P23-201ENST00000560090 1207 ntBASIC29.84■■■□□ 2.37
CFTRP13569 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC29.84■■■□□ 2.37
CFTRP13569 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC29.84■■■□□ 2.37
CFTRP13569 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC29.84■■■□□ 2.37
CFTRP13569 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
CFTRP13569 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CFTRP13569 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CFTRP13569 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CFTRP13569 HNRNPA1P40-201ENST00000426371 1278 ntBASIC29.83■■■□□ 2.37
CFTRP13569 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC29.83■■■□□ 2.37
CFTRP13569 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC29.83■■■□□ 2.37
CFTRP13569 AC025048.6-201ENST00000634326 1161 ntBASIC29.83■■■□□ 2.37
CFTRP13569 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC29.83■■■□□ 2.37
CFTRP13569 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CFTRP13569 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CFTRP13569 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CFTRP13569 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC29.83■■■□□ 2.37
CFTRP13569 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.37
CFTRP13569 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.37
CFTRP13569 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC29.82■■■□□ 2.37
CFTRP13569 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC29.82■■■□□ 2.36
CFTRP13569 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
CFTRP13569 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 HLA-V-201ENST00000429037 534 ntBASIC29.82■■■□□ 2.36
CFTRP13569 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC29.82■■■□□ 2.36
CFTRP13569 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC29.82■■■□□ 2.36
CFTRP13569 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CFTRP13569 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms