Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC004870.1-201ENST00000315132 882 ntBASIC19.31■□□□□ 0.68
CLTAP09496 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.31■□□□□ 0.68
CLTAP09496 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.31■□□□□ 0.68
CLTAP09496 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.31■□□□□ 0.68
CLTAP09496 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLTAP09496 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.3■□□□□ 0.68
CLTAP09496 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLTAP09496 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.3■□□□□ 0.68
CLTAP09496 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.3■□□□□ 0.68
CLTAP09496 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLTAP09496 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.3■□□□□ 0.68
CLTAP09496 COX5BP2-201ENST00000392354 334 ntBASIC19.3■□□□□ 0.68
CLTAP09496 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.3■□□□□ 0.68
CLTAP09496 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.3■□□□□ 0.68
CLTAP09496 FAAHP1-202ENST00000446499 1238 ntBASIC19.3■□□□□ 0.68
CLTAP09496 AC132008.2-207ENST00000454517 770 ntBASIC19.3■□□□□ 0.68
CLTAP09496 EMBP1-201ENST00000458200 901 ntBASIC19.3■□□□□ 0.68
CLTAP09496 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.3■□□□□ 0.68
CLTAP09496 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.3■□□□□ 0.68
CLTAP09496 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.3■□□□□ 0.68
CLTAP09496 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.3■□□□□ 0.68
CLTAP09496 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
CLTAP09496 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLTAP09496 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CLTAP09496 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CLTAP09496 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.29■□□□□ 0.68
CLTAP09496 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CLTAP09496 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 DDX43P3-201ENST00000441064 443 ntBASIC19.29■□□□□ 0.68
CLTAP09496 AC122714.2-201ENST00000502787 707 ntBASIC19.29■□□□□ 0.68
CLTAP09496 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.29■□□□□ 0.68
CLTAP09496 AL121894.2-201ENST00000602977 491 ntBASIC19.29■□□□□ 0.68
CLTAP09496 REXO1L6P-202ENST00000619970 1078 ntBASIC19.29■□□□□ 0.68
CLTAP09496 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 BCL2-203ENST00000589955 5011 ntBASIC19.29■□□□□ 0.68
CLTAP09496 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLTAP09496 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.29■□□□□ 0.68
CLTAP09496 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLTAP09496 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.29■□□□□ 0.68
CLTAP09496 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms